BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB025B10SP1|AL428338
(884 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1566 1736 0.0
>3x_Contig1566
Length = 10355
Score = 1736 bits (875), Expect = 0.0
Identities = 883/885 (99%), Gaps = 1/885 (0%)
Strand = Plus / Plus
Query: 1 caatctttttatctcatttttaggaataccttccttaatcataatgtactccaaagaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3795 caatctttttatctcatttttaggaataccttccttaatcataatgtactccaaagaaac 3854
Query: 61 cttcccattaaagtatttcaccacttgtctaaatagcgtttgaagatcagtaggtaatgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3855 cttcccattaaagtatttcaccacttgtctaaatagcgtttgaagatcagtaggtaatgc 3914
Query: 121 ctcagcacatttgtacaaccatctcttttctaatgcagtattacgttctggttcaagaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3915 ctcagcacatttgtacaaccatctcttttctaatgcagtattacgttctggttcaagaat 3974
Query: 181 tatagtgaaatcattatcgttgatcatctccaaatcatcaaactcactggagttataatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3975 tatagtgaaatcattatcgttgatcatctccaaatcatcaaactcactggagttataatt 4034
Query: 241 ttcacctccagtaacaaaattaccggacttttcgtgtttgttcgatcttaagttatcctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4035 ttcacctccagtaacaaaattaccggacttttcgtgtttgttcgatcttaagttatcctt 4094
Query: 301 ttctagatcctcatcgacagctattttaatgcgcttgtccacacgtacatacacaaacgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4095 ttctagatcctcatcgacagctattttaatgcgcttgtccacacgtacatacacaaacgt 4154
Query: 361 caataattgagtgaggtatccgtacctcatgagccatgccagggcattcaaatacataga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4155 caataattgagtgaggtatccgtacctcatgagccatgccagggcattcaaatacataga 4214
Query: 421 tttatgttcattggatggtatgatatgcccgavaggtctgggtttctgggttgacataag 480
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4215 tttatgttcattggatggtatgatatgcccgaaaggtctgggtttctgggttgacataag 4274
Query: 481 ttgaaggaacgatggcaaagaaggtaaggagggaaatttttcattgaataccttcttgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4275 ttgaaggaacgatggcaaagaaggtaaggagggaaatttttcattgaataccttcttgtt 4334
Query: 541 ttggtatatcaacgacggttcatcgttgttattcacaggaacttcttgttgtcttattaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4335 ttggtatatcaacgacggttcatcgttgttattcacaggaacttcttgttgtcttattaa 4394
Query: 601 ggtgtcgtattcgccatgtttgaagtcatcagttgaaaatcctgagattggcgccaatgg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4395 ggtgtcgtattcgccatgtttgaagtcatcagttgaaaatcctgagattggcgccaatgg 4454
Query: 661 agaaactatatatgtgtttctcgatgatattggcagtatcaaacgggcgtgacg-cagta 719
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 4455 agaaactatatatgtgtttctcgatgatattggcagtatcaaacgggcgtgacgccagta 4514
Query: 720 tattaaatgtagacataacgactttaaagtagtttcacagaattgatcatcatatgagga 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4515 tattaaatgtagacataacgactttaaagtagtttcacagaattgatcatcatatgagga 4574
Query: 780 atcattagaatcgattagctctttaattaataatttatattgaccaagccttatagtggg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4575 atcattagaatcgattagctctttaattaataatttatattgaccaagccttatagtggg 4634
Query: 840 cttcaactgtcttacaaggttgatcaaaagtaaatcagtaacgcc 884
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4635 cttcaactgtcttacaaggttgatcaaaagtaaatcagtaacgcc 4679
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6996
Number of Sequences: 1807
Number of extensions: 6996
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 884
length of database: 10,358,551
effective HSP length: 16
effective length of query: 868
effective length of database: 10,329,639
effective search space: 8966126652
effective search space used: 8966126652
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)